DS9 vs. ximtool, and BUS error problems
gcardonav wrote on May 25, 2010
Hi guys:
I posted about this before, but I am not sure where else to go.
My first question is what is the main difference between ximtool and DS9 ? I am asking because for my research I could use DS9 or ximtool, so the friendlier the program the better for a rookie like me.
My second question is about an error I am getting with either ximtool or ds9. I am trying to display a simple fits image and still getting the same error all the time
This is with either DS9 or ximtool. Could this be a problem with the installation.
Last a simple question, is there an x11 or iraf command to open ds9 as we open ximtool
Gus
I posted about this before, but I am not sure where else to go.
My first question is what is the main difference between ximtool and DS9 ? I am asking because for my research I could use DS9 or ximtool, so the friendlier the program the better for a rookie like me.
My second question is about an error I am getting with either ximtool or ds9. I am trying to display a simple fits image and still getting the same error all the time
ccdred> display Dark.fits 1
ERROR: bus error
ccdred> imstat Dark.fits
# IMAGE NPIX MEAN STDDEV MIN MAX
ERROR: bus error
ccdred> implot Dark.fits
ERROR: bus error
ccdred> imexam Dark.fits
ERROR: bus error
called as: `imexamine (input=Dark.fits)'
ccdred>This is with either DS9 or ximtool. Could this be a problem with the installation.
Last a simple question, is there an x11 or iraf command to open ds9 as we open ximtool
ximtool &I appreciate all the help,Gus
Mike Fitzpatrick wrote on May 25, 2010
A 'bus error' is fairly generic and I've looked at your image from the early posting and didn't see a problem. We can start to rule out problems in your data by testing to see whether those same command work on the dev$pix test image. If so, then try
and repeat on the 'foo.fits' image to see whether it's something about your installation or just FITS files in general. TO do any more I'd need to know your OS and IRAF versions. If it were any kind of installation problem then it would be something along the lines of having the wrong binaries installed, obviously the CL works and the binaries are being found.
As for the second question, if you installed the commandline version of DS9 and put it in some place like /usr/local/bin then the same
command should work. If this is a Mac and you installed the DS9.app version then try
cl> imcopy dev$pix foo.fitsand repeat on the 'foo.fits' image to see whether it's something about your installation or just FITS files in general. TO do any more I'd need to know your OS and IRAF versions. If it were any kind of installation problem then it would be something along the lines of having the wrong binaries installed, obviously the CL works and the binaries are being found.
As for the second question, if you installed the commandline version of DS9 and put it in some place like /usr/local/bin then the same
ds9 &command should work. If this is a Mac and you installed the DS9.app version then try
open -a ds9
gcardonav wrote on May 25, 2010
Hi:
Well it seems that my problem was due to installation. I got scisoft from my tech at school, and it comes with iraf. I am now able to run everything but one. Is there anything special for me to run implot, I been trying by either typing
Thanks for the time and help,
Gus
Well it seems that my problem was due to installation. I got scisoft from my tech at school, and it comes with iraf. I am now able to run everything but one. Is there anything special for me to run implot, I been trying by either typing
ecl>implot trial.fitsbut I get nothing. I am able to run imstat, imexam, but when I try to use the different tools in imexam, again I get nothing. Well not nothing but a bunch of letters and numbers that make no sense. Any idea why this is.Thanks for the time and help,
Gus
Mike Fitzpatrick wrote on May 25, 2010
gcardonav wrote on May 25, 2010
Thank you that fixed that problem, but it seems that with the scisoft I am still getting a problem running iraf commands. When I run zerocombine I get this error. Once again is a bus error problem. I am getting the same issue with darkcombine and flatcombine. Any idea what it could be ?
BTW I have a MacBook Pro running with snow leopard, with X11. Sorry for all these questions but I really want to get this down to work properly.
Gus
outtype="real"\noffsets="none"\nmasktype="none"\n
maskvalue=0.\nblank=0.\nscale="none"\nzero="none"\n
weight="no"\nstatsec=""\nlthreshold=INDEF\nhthreshold=INDEF\n
nlow=1\nnhigh=1\nnkeep=1\nmclip=yes\nlsigma=2.5\nhsigma=2.5\n
rdnoise="9.1"\ngain="1.3"\nsnoise="0."\nsigscale=0.1\n
pclip=-0.5\ngrow=0\nmode="ql"\n$nargs=1\n
--------------------------------
----- task combine - line 17 (INSPECT) -----
17 521+6: inspect instrument
17 527+3: end
----- task combine - line 18 (INSPECT) -----
18 521+5: inspect logfile
18 526+3: end
----- task combine - line 19 (INSPECT) -----
19 521+5: inspect verbose
19 526+3: end
May 27 18:26: IMCOMBINE
combine = average, scale = none, zero = none, weight = none
reject = crreject, mclip = yes, nkeep = 1
rdnoise = 9.1, gain = 1.3, snoise = 0., hsigma = 2.5
blank = 0.
Images
DARK_Prompt5_09_02_09_282288__001.fits
DARK_Prompt5_09_02_09_282288__002.fits
DARK_Prompt5_09_02_09_282288__003.fits
DARK_Prompt5_09_02_09_282288__004.fits
DARK_Prompt5_09_02_09_282288__005.fits
DARK_Prompt5_09_02_09_282288__006.fits
DARK_Prompt5_09_02_09_282288__007.fits
DARK_Prompt5_09_02_09_282288__008.fits
DARK_Prompt5_09_02_09_282288__009.fits
DARK_Prompt5_09_02_09_282288__010.fits
DARK_Prompt5_09_02_09_282288__011.fits
DARK_Prompt5_09_02_09_282288__012.fits
DARK_Prompt5_09_02_09_282288__013.fits
DARK_Prompt5_09_02_09_282288__014.fits
DARK_Prompt5_09_02_09_282288__015.fits
DARK_Prompt5_09_02_09_282288__016.fits
DARK_Prompt5_09_02_09_282288__017.fits
DARK_Prompt5_09_02_09_282288__018.fits
DARK_Prompt5_09_02_09_282288__019.fits
DARK_Prompt5_09_02_09_282288__020.fits
Output image = Zero, ncombine = 20
----- task combine - line 20 (CALL) -----
20 521+5: call error
20 526+6: pushconst 501
20 532+4: posargset 0
20 536+9: pushconst `bus error'
20 545+4: posargset 1
20 549+3: exec
----- exec builtin error : line 20 -----
----- disconnect noaobin$x_ccdred.e -----
ERROR: bus error
cl_error: abort=1 trace=1 flpr=1
cl_error: code=501 do_err=1 errtype=1/1 task='zerocombine'
"pclip=pclip, grow=0)"
line 47: ccdred$zerocombine.cl
called as: `zerocombine (mode=h)'BTW I have a MacBook Pro running with snow leopard, with X11. Sorry for all these questions but I really want to get this down to work properly.
Gus
Mike Fitzpatrick wrote on May 25, 2010
It's probably related to whatever the earlier problem was, but this time affecting the NOAO package binaries (which are in a different directory). If what you got was an older version of SciSoft then I'd suggest trying a newer version (see http://web.mac.com/npirzkal/Scisoft/Scisoft.html) or just install from the release files on this site (see the download link above).
gcardonav wrote on May 25, 2010
Well I uninstall the old scisoft and I am preparing to install the new one. What I don't see are any instructions when it comes to tools like ximtool or xgterm. Should I delete these from my computer as well, or is there any file that I need to change for these two.
Gus
Gus
Mike Fitzpatrick wrote on May 25, 2010
I don't know if Scisoft comes with the X11IRAF tools, but if what you have works there's no point in deleting them.
Last post on May 25, 2010